| | | | Bohouňovický p. | 110010000100 | * | | ** | | | | |
| | | | Barchovický p. | 110030000100 | * | | ** | | | | |
| | | | Radlický p. | 110030000600 | * | | ** | | | | |
| | | | Malotický p. | 110050000100 | * | | ** | | | | |
| | | | Špandava | 110070000100 | * | | ** | | | | |
| | | | Střebovka | 110090000100 | * | | ** | | | | |
| | | | bezejmenný tok | 110100000400 | * | | ** | | | | |
| | | | Bečvárka | 110110000100 | * | | ** | | | | |
| | | | Drahobudický p. | 110140000100 | * | | ** | | | | |
| | | | Blinka | 110190000100 | * | | ** | | | | |
| | | | Káča | 110230000100 | * | | ** | | | | |
| | | | Šembera | 110250000100 | od soutoku s Bušincem | | ** | | | | |
| | | | Bušinec | 110280000100 | * | | ** | | | | |
| | | | Jalový p. | 110300000100 | * | | ** | | | | |
| | | | Milčický p. (Prokopka) | 110370000100 | * | | ** | | | | |
| | | | Pečecký p. | 110390001000 | * | | ** | | | | |
| | | | Chvalovický p. | 110390001900 | * | | ** | | | | |
| | | | Kovanický p. | 110440000100 | * | | ** | | | | |
| 40 L | Kostelecké p. | Šembera | 110250000100 | | | * | 24,5 | do soutoku s Bušincem | 16,7 | | 54 | 1-04-06 část |
| | | | bezejmenný tok | 110270000200 | * | | ** | | | | |
| | Bylanka | 110320000100 | | | * | | do soutoku s Výrovkou | | | | 1-04-06 část |
| | Výmola | 110560000100 | | | * | | do soutoku s Labem | | | | 1-04-07 část |
| | | | Jirenský p. | 110650000100 | * | | ** | | | | |
| 41 L | Jizera hraniční | Jizera | 110740000100 | | | * | 163,3 | do soutoku s Mumlavou | 142,9 | hranice s Polskem | 31 | 1-05-01 část |
| | | | Jizerka | 110770000100 | * | | ** | | | | |
| | | | Martinský p. | 110780002000 | * | | ** | | | | |
| 42 L | Jizera semilská | Jizera | 110740000100 | | | od soutoku s Martinským p. | 142,9 | do soutoku s Kamenicí | 101,1 | | 352 | 1-05-01 část |
| | | | Mumlava | 110790000100 | * | | od soutoku s Rýžovištním p. | | | | |
| | | | Lubošská Bystřice | 110790002000 | * | | ** | | | | |
| | | | Polomová Bystřice | 110790002100 | * | | ** | | | | |
| | | | Milnice | 110820000.100 | * | | ** | | | | |
| | | | bezejmenný tok | 110820000200 | * | | ** | | | | |
| | | | Kamenice | 110820001200 | * | | ** | | | | |
| | | | Huťský p. | 110850000100 | * | | ** | | | | |
| | | | Černý p. | 110850000600 | * | | ** | | | | |
| | | | Vejpálický p. | 110890000100 | *** | | ** | | | | |
| | | | Roudnický p. | 110910000100 | *** | | ** | | | | |
| | | | Jizerka | 110930000100 | *** | | ** | | | | |
| | | | Kotelský p. | 110930001400 | *** | | ** | | | | |
| | | | Kozelský p. | 110940000100 | *** | | ** | | | | |
| | | | Cedron | 110960000100 | *** | | ** | | | | |
| | | | Jilemka | 110980000100 | *** | | ** | | | | |
| | | | Víchovský p. | 110990001000 | *** | | ** | | | | |
| | | | Olšina | 111010000100 | *** | | ** | | | | |
| | | | Hrádecký p. | 111030000100 | *** | | ** | | | | |
| | | | Oleška | 111080000100 | *** | | ** | | | | |
| | | | Nedařížský p. | 111080003000 | *** | | ** | | | | |
| | | | bezejmenný tok | 111080004200 | *** | | ** | | | | |
| | | | Rokytka | 111090000100 | *** | | ** | | | | |
| | | | Popelka | 111110000100 | *** | | ** | | | | |
| | | | Černá | 111120000100 | *** | | ** | | | | |
| | | | Tampelačka | 111150000100 | *** | | ** | | | | |
| | | | Bukovecký p. | 111150001400 | *** | | ** | | | | |
| | | | Kružský p. | 111160000100 | *** | | ** | | | | |
| | | | Kundratický p. | 111190000100 | *** | | ** | | | | |
| | | | Želešský p. | 111210000100 | *** | | ** | | | | |
| | | | Stružinecký p. | 111230000100 | *** | | ** | | | | |
| | | | Královský p. | 111230000200 | *** | | ** | | | | |
| | | | Hořenský p. | 111250000100 | *** | | ** | | | | |
| | | | bezejmenný tok | 111250000200 | * | | ** | | | | |
| | | | bezejmenný tok | 111250000500 | * | | ** | | | | |
| | | | bezejmenný tok | 111260000400 | * | | ** | | | | |
| | | | Chuchelenský p. | 111290000100 | *** | | ** | | | | |
| 43 L | Kamenice jizerská | Kamenice | 111310000100 | | | * | 31,8 | do soutoku s Jizerou | 0,0 | | 180 | 1-05-01 část |
| | | | Blatný p. | 111320000100 | *** | | ** | | | | |
| | | | Jedlová | 111340000100 | * | | ** | | | | |
| | | | bezejmenný tok | 111340001200 | * | | ** | | | | |
| | | | bezejmenný tok | 111350000800 | * | | ** | | | | |
| | | | Smržovský p. | 111360000100 | * | | ** | | | | |
| | | | bezejmenný tok | 111420000200 | * | | ** | | | | |
| | | | Bárovský p. | 111440000100 | * | | ** | | | | |
| | | | Prorubský p. | 111450000400 | *** | | ** | | | | |
| | | | Zlatník | 111460000100 | *** | | ** | | | | |
| | | | Dračí p. | 111460000600 | *** | | ** | | | | |
| | | | Vošmenda | 111500000100 | *** | | ** | | | | |
| 44 L | Desná jizerská | Děsná | 111420000100 | | | *** | 3,2 | do soutoku s Jizerou | 0,0 | | 524 | 1-05-01 část |
| | | | Černá Desná | 111380000100 | *** | | ** | | | | |
| | | | Černá Říčka | 111390000100 | *** | | ** | | | | |
| | | | Bílá Desná | 111410000100 | *** | | ** | | | | |
| 45 L | Jizera turnovská | Jizera | 110740000100 | | | od soutoku s Kamenicí | 101,1 | do soutoku s Nedbalkou | 56,4 | | 191 | 1-05-01 část |
| | | | Mlýnský p. (Smrčský) | 111540000200 | * | | ** | | | | |
| | | | Žemovník | 111550000100 | * | | ** | | | | |
| | | | Kopaňský p. | 111560000100 | * | | ** | | | | |
| | | | Plchovský p. | 111560000600 | * | | ** | | | | |
| | | | Vazovecký p. | 111590000100 | *** | | ** | | | | |
| | | | Stebenka | 111610000100 | *** | | ** | | | | |
| | | | Libuňka | 111630000100 | *** | | ** | | | | |
| | | | Boučnice | 111640000100 | * | | ** | | | | |
| | | | Javorníce | 111660000100 | * | | ** | | | | |
| | | | bezejmenný tok | 111660000200 | * | | ** | | | | |
| | | | Veselka | 111670100100 | *** | | ** | | | | |
| | | | bezejmenný tok | 111670101600 | * | | ** | | | | |
| | | | Kotelský p. | 111670103000 | * | | ** | | | | |
| | | | Tisovka | 111670200100 | * | | ** | | | | |
| | | | Koudelka | 111670500200 | * | | ** | | | | |
| | | | Karlovický p. | 111690000100 | * | | ** | | | | |
| | | | Čtveřínský p. | 111740000100 | * | | ** | | | | |
| | | | Modřišický p. | 111750000200 | * | | ** | | | | |
| | | | Podhájský p. | 111753000900 | * | | ** | | | | |
| | | | Žehrovka | 111760000100 | *** | | ** | | | | |
| | | | Cýrka | 111760002600 | * | | ** | | | | |
| | | | Kacanovský p. | 111790000100 | * | | ** | | | | |
| | | | Arnoštický p. | 111810000100 | * | | ** | | | | |
| | | | Pěnčínský p. | 111840000100 | * | | ** | | | | |
| | | | bezejmenný tok | 112020000200 | * | | ** | | | | |
| 46 L | Mohelka | Mohelka | 111860000100 | | | | 35,2 | do soutoku s Jizerou | 0,0 | | 92 | 1-05-02 část |
| | | | Rádelský p. | 111860004800 | * | | ** | | | | |
| | | | Bezděčínský p. | 111870000100 | * | | ** | | | | |
| | | | Oharka | 111890000100 | * | | ** | | | | |
| | | | Bystrá | 111900000100 | * | | ** | | | | |
| | | | bezejmenný tok | 111900000600 | * | | ** | | | | |
| | | | Ještědka | 111930000100 | * | | ** | | | | |
| | | | Rašovka | 111940000100 | * | | ** | | | | |
| | | | bezejmenný tok | 111970000200 | * | | ** | | | | |
| | | | Malá Mohelka | 111990000100 | * | | ** | | | | |
| | | | Zábrdka | 112040000100 | * | | ** | | | | |
| | | | Bělá | 112130000100 | * | | ** | | | | |
| 47 K | Jizera bakovská | Jizera | 110740000100 | | | od soutoku s Nedbalkou | 56,4 | do soutoku s Klenicí | 36,8 | včetně Nedbalky | 151 | 1-05-02 část |
| | | | Nedbalka | 112020000100 | * | | ** | | | | |
| | | | Veselka | 112110000100 | *** | | ** | | | | |
| | | | Kněžmostka | 112250000100 | * | | ** | | | | |
| | | | bezejmenný tok | 112250002400 | * | | ** | | | | |
| | | | Býčinský p. (Bosenský) | 112260000100 | * | | ** | | | | |
| 48 K | Jizera dolní | Jizera | 110740000100 | | | od soutoku s Klenici | 36,8 | do soutoku s Labem | 0,0 | včetně Klenice | 132 | 1-05-02 část |
| | | | Klenice | 112330000100 | * | | ** | | | | |
| | | | Sobotka | 112340000100 | * | | ** | | | | |
| | | | Spyšovský p. | 112350000100 | * | | ** | | | | |
| | | | Trnický p. | 112370001400 | * | | ** | | | | |
| | | | Bousovský p. | 112380000100 | * | | ** | | | | |
| | | | Řitonický p. | 112400000100 | * | | ** | | | | |
| | | | Vlčipolský p. | 112410000100 | * | | ** | | | | |
| | | | Přepeřský p. | 112440000100 | * | | ** | | | | |
| | | | Křešovský p. | 112480000100 | * | | ** | | | | |
| | | | Mlýnský p. | 112490000100 | * | | ** | | | | |
| | | | bezejmenný tok | 112530001210 | * | | ** | | | | |
| 49 L | Mělnické p. | Strenický p. | 112600000100 | | | * | 19,9 | do soutoku s Labem | 0,0 | | 39 | 1-05-03 část |
| | Hlavnovský p. | 112830000100 | | | * | | do soutoku s Labem | | | | 1-05-04 část |
| | Košátecký p. | 113060000100 | | | * | | do soutoku s Labem | | | | 1-05-04 část |
| 50 L | Vltava šumavská | Vltava | 113900000100 | | | od soutoku s Homolským p. | 430,3 | po hranice NP Šumava | 364,0 | část území NP Šumava, část VÚ | 660 | 1-06-01 část |
| | | | Teplá Vltava | 113360000100 | *** | | ** | | | | |
| | | | Kvildský p. | 113370000100 | *** | | ** | | | | |
| | | | Vydří p. | 113430000100 | *** | | ** | | | | |
| | | | Vltavský p. | 113470000100 | *** | | ** | | | | |
| | | | Kaplický p. | 113570000100 | *** | | ** | | | | |
| | | | Řasnice | 113590000100 | *** | | ** | | | | |
| | | | Řaska | 113590000200 | *** | | ** | | | | |
| | | | bezejmenný tok | 113590000400 | *** | | ** | | | | |
| | | | Hraniční p. | 113600000100 | *** | | ** | | | | |
| | | | Mechový p. | 113620000100 | *** | | ** | | | | |
| | | | Častá | 113640000100 | *** | | ** | | | | |
| | | | Olšinka | 113690000100 | *** | | ** | | | | |
| | | | Volarský p. | 113750000100 | *** | | ** | | | | |
| | | | Mlýnský p. | 113760000100 | *** | | ** | | | | |
| | | | Studená Vltava | 113790000100 | *** | | ** | | | | |
| | | | Údolský p. | 113790000400 | *** | | ** | | | | |
| | | | Světlá | 113800000100 | od zaústění Schwarzenberského kanálu | | ** | | | | |
| | | | bezejmenný tok | 113800002000 | *** | | ** | | | | |
| | | | Jelení p. | 113840000100 | *** | | ** | | | | |
| | | | Mlýnský p. | 113860000100 | *** | | ** | | | | |
| | | | bezejmenný tok | 113860000200 | *** | | ** | | | | |
| | | | Hučina | 113880000100 | *** | | ** | | | | |
| | | | Korunáč | 113930000100 | *** | | ** | | | | |
| | | | Uhlíkovský p. | 113950000100 | *** | | ** | | | | |
| | | | Záhvozdenský p. | 113960000100 | *** | | ** | | | | |
| | | | Jezerní p. | 113990000100 | *** | | ** | | | | |
| | | | Rybniční p. | 113990001000 | *** | | ** | | | | |
| | | | Hučice | 113990004400 | *** | | ** | | | | |
| | | | Jelení p. | 113990005800 | *** | | ** | | | | |
| | | | Koňský p. | 114000000100 | *** | | ** | | | | |
| 51 L | Přítoky Lipna | Novopecký p. | 114030000100 | | | *** | | ** | | část VÚ | 284 | 1-06-01 část |
| | Smrčinský p. | 114050000100 | | | *** | | ** | | | | 1-06-01 část |
| | Pernecký p. | 114070000100 | | | *** | | ** | | | | 1-06-01 část |
| | Hamerský p. | 114100100100 | | | *** | 2,1 | ** | 0,0 | | | 1-06-01 část |
| | | | Huťský p. | 114100200100 | *** | | ** | | | | |
| | Ostřice | 114130000100 | | | *** | | ** | | | | 1-06-01 část |
| | Olšina | 114150000100 | | | *** | 16,3 | ** | 0,0 | | | 1-06-01 část |
| | | | Loutecký p. | 114200000100 | *** | | ** | | | | |
| | | | bezejmenný tok | 114230000200 | *** | | ** | | | | |
| | | | bezejmenný tok | 114230000400 | *** | | ** | | | | |
| | Pestříce | 114290000100 | | | *** | 10,0 | ** | 0,0 | | | 1-06-01 část |
| | | | bezejmenný tok | 114290000600 | *** | | ** | | | | |
| | | | Kesselbach | 114290001200 | *** | | ** | | | | |
| | | | bezejmenný tok | 114290001400 | *** | | ** | | | | |
| | | | bezejmenný tok | 114290001600 | *** | | ** | | | | |